You can select or deselect datasets by clicking on the cells in the grid.
The currently selected datasets are shown in the Selected Datasets table at the bottom of the page.
If you want to see those datasets in the USCS Genome Browser, click on the Visualize in Genome Browser button.
At any point, you can save your current session by clicking on Save Session.
To get the IHEC Data Hub from the selected datasets, click Get Metadata.
It is also possible to add external data, either from one of our default source or from your own IHEC Data Hub. For more informations, see the Add External Hub button. Note that track correlation is not available with external data hubs.
If a dataset has an embargo, the institution datasets count will be displayed in red. Click on that number to be brought to the relevant information page.
The search box accepts a list of expression formatted as:
KEY = VALUE or
KEY = "VALUE".
= (equal to) and
!= (different than)
The expressions can be separated by either
donor_age = 25 and donor_sex != "Male"
(Will find all datasets where the donor is 25 years old, and is not a Male)
Visualization of correlation values on more than 300 datasets is currently not supported.
Alternatively, you can compute correlation scores on any number of datasets, including datasets external to IHEC, using the Genomic Efficient Correlator (GeEC) tool, offered within a public instance of Galaxy here.
Grid session link: Keep this URL to restore your current grid session.
UCSC track hub link: Can be used in any UCSC Browser setup, such as the main UCSC server.
link at the bottom right of the grid